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r8 - 11 Jun 2007 - 11:19:23 - RogerHyamYou are here: TWiki >  TAG Web > TaxonNameLsidVoc > LsidVocs > LsidVocsDarwinCore

LsidVocsDarwinCore


warning This needs to be updated to take into account the new TaxonOccurrenceLsidVoc vocabulary that replaces SpecimenLsidVoc and OccurrenceRecordLsidVoc. The mapping is more or less trivial as most or the properties retain their current names or become more like the DarwinCore? equivalents.

This is an attempt to reconcile the DarwinCoreDraftStandard with the LSIDVocs in a human readable fashion. Much of the OccurrenceRecord? and Specimen objects is base on DarwinCoreDraftStandard anyhow so they should match. More about how the OccurrenceRecord? has been modeled is in OccurrenceRecordLsidVoc.

DwC Extension DwC Element LsidVoc Property
Core GlobalUniqueIdentifier @rdf:about The about attribute in either Specimen or OccurrenceRecord?.
Core DateLastModified dc:modified property. Additional information may be given in dc:source, dcterms:replace, dcterms:provenance, dcterms:hasVersion, dcterms:isVersionOf and owl:versionInfo properties
Core BasisOfRecord n/a If the object is a specimen the BasisOfRecord? is given by the specimen type. If it is an OccurrenceRecord? without an associated specimen then it is implied from the procedure property and others.
Core InstitutionCode Specimen.hostCollectionString But may also be normalized out in the hostCollection property.
Core CollectionCode Specimen.hostCollectionString But may also be normalized out in the hostCollection property.
Core CatalogNumber Specimen.SpecimenID Other identifiers, such as barcodes, can be included using dc:indentifier
Core InformationWithheld isRestricted  
Core DarwinCore.Remarks note  
Core ScientificName OccurrenceRecord/identifiedTo/ Identification/taxonName The TaxonConcept? may be further broken down in the 'taxon' property.
Core HigherTaxon Either taxonomicPlacementFormal or taxonomicPlacementInformal
Core DarwinCore.Kingdom as HigherTaxon?
Core DarwinCore.Phylum as HigherTaxon?
Core DarwinCore.Class as HigherTaxon?
Core DarwinCore.Order as HigherTaxon?
Core DarwinCore.Family as HigherTaxon?
Core DarwinCore.Genus OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/genusPart
Core SpecificEpithet OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/specificEpithet
Core InfraspecificRank OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/rankString Could also use 'rank' property with controlled vocabulary. Use for all ranks
Core InfraSpecificEpithet OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/infraspecificEpithet
Core AuthorYearOfScientificName OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/authorship
Core NomenclaturalCode OccurrenceRecord/identifiedTo/ Identification/taxon/TaxonName/nomenclaturalCode Controlled vocabulary of URIs
Core IdentificationQualifer OccurrenceRecord/identifiedTo/ Identification/note
Core HigherGeography OccurrenceRecord/higherGeography
Core DarwinCore.Continent OccurrenceRecord/continent
Core WaterBody OccurrenceRecord/waterBody
Core IslandGroup OccurrenceRecord/islandGroup
Core DarwinCore.Island OccurrenceRecord/island
Core DarwinCore.Country OccurrenceRecord/country
Core StateProvince OccurrenceRecord/stateProvince
Core DarwinCore.County OccurrenceRecord/county
Core DarwinCore.Locality OccurrenceRecord/locality
Core MinimumElevationInMeters OccurrenceRecord/minimumElevationMeters
Core MaximumElevationInMeters OccurrenceRecord/maximumElevationMeters
Core MinimumDepthInMeters OccurrenceRecord/minimumDepthInMeters
Core MaximumDepthInMeters OccurrenceRecord/maximumDepthInMeters
Core CollectingMethod OccurrenceRecord/procedureDescriptor This is for the method of deriving the OccurrenceRecord? rather than the Specimen. More details can be put in the procedure property.
Core ValidDistributionFlag OccurrenceRecord/validDistributionFlag
Core EarliestDateCollected OccurrenceRecord/earliestDateCollected
Core LatestDateCollected OccurrenceRecord/latestDateCollected
Core DayOfYear OccurrenceRecord/dayOfYear
Core DarwinCore.Collector Specimen/collector See also collectorTeam
Core DarwinCore.Sex Specimen/sex
Core LifeStage Specimen/lifeStage
Core DarwinCore.Attributes Not Supported. dcterm:description could be used in its place. Use of SDD subset or TaxonDescriptionModel? in the future.
Core ImageURL hasDigitalImage if the image is of a physical specimen or digitalRepresentation if the specimen itself is a digital object such as a sound recording.
Core RelatedInformation dc:relation
CuratorialExtension CatalogNumberNumeric Specimen/specimenID
CuratorialExtension IdentifiedBy Identification/expertName May also be normalized in the expert property
CuratorialExtension DateIdentified Identification/date
CuratorialExtension CollectorNumber Specimen/collectorsFieldNumber
CuratorialExtension FieldNumber Specimen/collectorsBatchNumber
CuratorialExtension FieldNotes Specimen/fieldNotes
CuratorialExtension VerbatimCollectingDate Specimen/verbatimCollectingDate
CuratorialExtension VerbatimElevation Specimen/verbatimElevation
CuratorialExtension VerbatimDepth Specimen/verbatimDepth
CuratorialExtension DarwinCore.Preparations Specimen/kindOfSpecimenString but it would be clearer to use the Specimen/kindOfSpecimen and values from a controlled vocabulary. To represent a series of specimens that have gone through some preparation/separation process the Specimen/derivedFrom and Specimen/procedure properties should be employed.
CuratorialExtension TypeStatus Specimen/typeStatusString It is also possible to indicated type status using a controlled vocabulary in the typeStatus field and to indicate the name for which this is a type specimen using the typeForName property
CuratorialExtension GenBankNumber Not currently supported
CuratorialExtension OtherCatalogNumbers dcterm:identifier should be used for all other identifiers.
CuratorialExtension RelatedCatalogedItems dc:relation
CuratorialExtension DarwinCore.Disposition Specimen/disposition
CuratorialExtension IndividualCount Specimen/individualCount
GeospatialExtension DecimalLatitude OccurrenceRecord/decimalLatitude
GeospatialExtension DecimalLongitude OccurrenceRecord/decimalLongitude
GeospatialExtension GeodeticDatum OccurrenceRecord/geodeticDatum
GeospatialExtension CoordinateUncertaintyInMeters OccurrenceRecord/coordinateUncertaintyInMeters
GeospatialExtension PointRadiusSpatialFit OccurrenceRecord/pointRadiusSpatialFit
GeospatialExtension VerbatimCoordinates Specimen/verbatimCoordinates
GeospatialExtension VerbatimLatitude Specimen/verbatimLatitude
GeospatialExtension VerbatimLongitude Specimen/verbatimLongitude
GeospatialExtension VerbatimCoordinateSystem Specimen/verbatimCoordinateSystem
GeospatialExtension GeoreferenceProtocol OccurrenceRecord/georeferenceProtocol
GeospatialExtension GeoreferenceSources OccurrenceRecord/georeferenceSources
GeospatialExtension GeoreferenceVerificationStatus OccurrenceRecord/georeferenceVerificationStatus
GeospatialExtension GeoreferenceRemarks OccurrenceRecord/georeferenceRemarks
GeospatialExtension DarwinCore.WKTFootprint OccurrenceRecord/wktFootprint
GeospatialExtension FootprintSpatialFit OccurrenceRecord/footprintSpatialFit


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